Taxonomy Builder (router, compatibility mode)

Triggers & routing

• Trigger: taxonomy, taxonomy builder, 分类, 主题树, taxonomy.yml.
• Use when: survey/snapshot 的结构阶段（NO PROSE），已有 papers/core_set.csv，需要生成可映射且读者友好的主题结构。
• Skip if: 已经有批准过且可映射的 taxonomy（不要无意义重构）。
• Network: none.
• Guardrail: 避免泛化占位桶；保持 2+ 层且每节点有具体描述。

Build outline/taxonomy.yml from papers/core_set.csv.

P0 compatibility note:

• The output contract stays the same (outline/taxonomy.yml, YAML list, >=2 levels, concrete descriptions).
• Curated domain taxonomies now live in assets/domain_packs/*.yaml instead of Python prose.
• scripts/run.py stays a deterministic scaffold/helper: detect domain pack -> load pack when available -> otherwise fall back to the generic builder.

Load Order

1. references/overview.md
2. references/taxonomy_principles.md
3. If a domain pack applies, read its references/domain_pack_<domain>.md and assets/domain_packs/<domain>.yaml
4. Otherwise read references/archetypes_generic.md
5. Calibrate naming/description quality with references/examples_good.md and references/examples_bad.md

Current compatibility packs:

• llm_agents
• gen_image
• embodied_ai
• rag_evaluation

Explicit refinement marker

Create outline/taxonomy.refined.ok only after reviewing a manually refined taxonomy. The marker is honored only while it is newer than the taxonomy, its upstream evidence, and the generator; stale markers are removed and the prior taxonomy is backed up before regeneration.

Inputs

• papers/core_set.csv (required)
• Optional: papers/papers_dedup.jsonl
• Optional: DECISIONS.md, GOAL.md, queries.md

Outputs

• outline/taxonomy.yml

Asset contract

• assets/taxonomy_schema.json: machine-readable shape for domain packs / output expectations
• assets/domain_packs/*.yaml: compatibility domain packs for supported domains

Script role