github.com/aipoch/medical-research-skills2k

medical-research-skills

Hundreds of agent skills for medical research, including protocol design, data...

npx skills add aipoch/medical-research-skills -g -y

40 skills

Arxiv Preflight

Run a submission-readiness preflight on a manuscript before arXiv upload.

aipoch/medical-research-skills2k

Author Response Builder

Turns reviewer comments into structured, professional point-by-point responses linked...

aipoch/medical-research-skills2k

Batch Effect Correction

Use when correcting batch effects in merged bulk expression matrices with sample-level...

aipoch/medical-research-skills2k

Cerna Analysis

Use when building a ceRNA regulatory network from a key gene list by combining bundled...

aipoch/medical-research-skills2k

Cibersort Immune Infiltration Analysis

Use when estimating relative immune cell infiltration from a bulk expression matrix...

aipoch/medical-research-skills2k

Claim Strength Calibrator

Calibrates manuscript claim strength so wording matches the actual evidence level...

aipoch/medical-research-skills2k

Conference Abstract Writer

Condenses a full study into conference-submission abstract format.

aipoch/medical-research-skills2k

Consensus Clustering Analysis

Use when identifying stable sample subtypes from bulk expression matrices with...

aipoch/medical-research-skills2k

Consistency Checker Across Manuscript

Checks consistency across title, abstract, methods, results, figures, tables, and...

aipoch/medical-research-skills2k

Cover Letter Drafter

Drafts journal-ready cover letters for manuscript submission.

aipoch/medical-research-skills2k

Decision Curve Analysis

Use when evaluating the clinical utility of a binary prediction model from a single...

aipoch/medical-research-skills2k

Decision Tree Analysis

Use when building a decision tree model in R and generating feature importance ranking...

aipoch/medical-research-skills2k

Deg Screening Analysis

Use when screening differentially expressed genes from a bulk expression matrix between...

aipoch/medical-research-skills2k

Differential Expression Analysis

Use when analyzing bulk RNA-seq or microarray expression data to identify...

aipoch/medical-research-skills2k

Discussion Composer

Composes a Discussion around key findings, mechanisms, clinical relevance, and...

aipoch/medical-research-skills2k

Elastic Net Feature Selection

Use when selecting predictive genes or other molecular features from bulk expression...

aipoch/medical-research-skills2k

Estimate Immune Score Analysis

Use this skill to compute ESTIMATE immune-related microenvironment scores from a bulk...

aipoch/medical-research-skills2k

Figure Legend Writer

Writes complete, publication-grade figure legends that can stand on their own.

aipoch/medical-research-skills2k

Grant Specific Aims Writer

Writes Specific Aims pages for grant applications.

aipoch/medical-research-skills2k

Graphical Abstract Generator

Converts a biomedical study storyline into a graphical abstract and, when direct image...

aipoch/medical-research-skills2k

Introduction Logic Builder

Builds background-gap-objective logic for biomedical manuscript introductions with...

aipoch/medical-research-skills2k

Introduction Section Writer

Writes the full Introduction section of a biomedical manuscript based on an approved or...

aipoch/medical-research-skills2k

Latex Manuscript Format Converter

Converts existing manuscript content into LaTeX format aligned with a target journal...

aipoch/medical-research-skills2k

Lay Summary For Cross Disciplinary Teams

Rewrites technical research content into a structured lay summary that...

aipoch/medical-research-skills2k

Lightgbm Analysis

Use when training a LightGBM model on tabular data in R and returning model metrics...

aipoch/medical-research-skills2k

Limitation And Risk Writer

Acknowledges limitations in sample, design, measurement, and validation in a...

aipoch/medical-research-skills2k

Medical English Precision Editor

Improves medical English precision without changing the underlying facts, evidence...

aipoch/medical-research-skills2k

Methods Section Writer

Turns your protocol and analysis workflow into publication-ready Methods text.

aipoch/medical-research-skills2k

Paper Sprint Review

Scrum-inspired paper review, revision, and R&R workflow.

aipoch/medical-research-skills2k

Poster Storyline Builder

Reorganizes a paper into a storyline suitable for scientific posters.

aipoch/medical-research-skills2k

Reference Integrity Checker

Checks whether manuscript references are accurately matched to claims, appropriately...

aipoch/medical-research-skills2k

Reporting Guideline Compliance Checker

Checks biomedical manuscripts against reporting guidelines such as CONSORT, STROBE...

aipoch/medical-research-skills2k

Results Section Structurer

Organizes biomedical figures, analyses, and result blocks into a clear Results section...

aipoch/medical-research-skills2k

Results Section Writer

Writes the full Results section of a biomedical manuscript from a sufficiently clear...

aipoch/medical-research-skills2k

Revision Strategy Planner

Builds prioritized manuscript revision plans for major or minor revisions by separating...

aipoch/medical-research-skills2k

Slide Deck For Lab Meeting

Structures research progress into focused and actionable slides for lab meetings or...

aipoch/medical-research-skills2k

Table Narrative Writer

Converts biomedical table content into clear manuscript or presentation narrative by...

aipoch/medical-research-skills2k

Target Journal Matcher

Matches your study to appropriate journals based on topic, design, and evidence strength.

aipoch/medical-research-skills2k

Title And Abstract Optimizer

Optimizes manuscript titles and abstracts for information density, factual accuracy...

aipoch/medical-research-skills2k

Xgboost Analysis

Use when building XGBoost models on tabular data and returning feature importance...

aipoch/medical-research-skills2k