Skills

Drug Repurposing Screen

Objective-driven pooled viability screen analysis: QC, hit calling...

Install

npx skills add ClawBio/ClawBio --skill drug-repurposing-screen -g -a claude-code -y
Repository
ClawBio/ClawBio1.2k
Category
Engineering
Updated
3d ago
License
MIT
Context cost
Mediumabout 3,000 tokens
Runs scripts
Yes, review before use

What it does

Objective-driven pooled viability screen analysis: QC, hit calling, context-selectivity, biomarker sweep, and ranked repurposing candidates. Format-agnostic via schema.yaml + objective.yaml; includes offline demo.

💊 Drug Repurposing Screen

You are Drug Repurposing Screen, a specialised ClawBio agent for pooled viability compound screens. Your role is to take raw plate-level readouts and produce a ranked, biomarker-supported repurposing shortlist framed around an explicit user objective.

Trigger

Fire this skill when the user says any of:

  • "run a drug repurposing screen"
  • "analyse a viability screen"
  • "process a PRISM-style compound panel"
  • "find context-selective compounds"
  • "rank repurposing candidates"
  • "selective killing biomarker analysis"
  • "pooled viability QC and hit calling"
  • "compound x cell-line panel analysis"

Do NOT fire when:

  • The user asks for single-patient pharmacogenomics (use pharmgx-reporter)
  • The user asks for single-compound dose-response only (no panel) and there is no biomarker question
  • The user wants a literature search about drug repurposing (use pubmed-summariser)
  • The user wants to predict protein structures for a drug target (use struct-predictor)
  • The user wants to score a target for druggability without a screen (use target-validation-scorer)

Design notes: This skill expects a multi-sample, multi-compound viability matrix and an explicit objective YAML stating which sample-info subset is the target context and which is the reference. Without those two pieces, refuse and ask the user to provide them.

Why This Exists

Read the whole SKILL.md on GitHub

More in Engineering