ClawBio

🦖 ClawBio - The first bioinformatics-native AI agent skill library.

/plugin marketplace add ClawBio/ClawBio

40 skills

Affinity Proteomics

Unified analysis pipeline for affinity-based proteomics platforms, Olink (PEA, NPX)...

ClawBio/ClawBio1.2k

Analyze Fasta

Analyze a single FASTA file (nucleotide or protein), compute sequence-level metrics...

ClawBio/ClawBio1.2k

Ancestry Risk Profiler

Infers genetic super-population ancestry from a 23andMe/AncestryDNA file and computes...

ClawBio/ClawBio1.2k

Archaic Introgression

Detect Neanderthal and Denisovan introgression segments from modern human genomes

ClawBio/ClawBio1.2k

Arrayexpress Fetch

Query metadata and download data from ArrayExpress, EMBL-EBI's functional genomics...

ClawBio/ClawBio1.2k

Article Data Fetcher

Given an article DOI or PubMed ID, discover and download the genomics data files...

ClawBio/ClawBio1.2k

Bgpt MCP

Search scientific papers via the BGPT MCP server and retrieve structured experimental...

ClawBio/ClawBio1.2k

Bigquery Public

Run read-only SQL against BigQuery public datasets with local result capture, cost...

ClawBio/ClawBio1.2k

Bio Orchestrator

Meta-agent that routes bioinformatics requests to specialised sub-skills.

ClawBio/ClawBio1.2k

Bioconductor Bridge

Bioconductor package discovery, workflow recommendation, setup inspection, and starter...

ClawBio/ClawBio1.2k

Bioqc MCP

Automated sequencing quality control and advanced visualization wrapping FastQC...

ClawBio/ClawBio1.2k

Biostudies Fetch

Query metadata and download data from EMBL-EBI BioStudies, the database that describes...

ClawBio/ClawBio1.2k

Busco Assessor

Genome, transcriptome, and protein completeness assessment via BUSCO v6.

ClawBio/ClawBio1.2k

Cell Detection

Cell segmentation in fluorescence microscopy images.

ClawBio/ClawBio1.2k

Celltype Specificity Profiler

Given a gene and a single-cell atlas, compute how cell-type-specific its expression is...

ClawBio/ClawBio1.2k

Claw Amplicon Qc

16S/18S rRNA amplicon preprocessing, from raw paired-end FASTQ files through N removal...

ClawBio/ClawBio1.2k

Claw Ancestry Pca

Ancestry decomposition PCA against the Simons Genome Diversity Project

ClawBio/ClawBio1.2k

Claw Metagenomics

Shotgun metagenomics profiling, taxonomy, resistome, and functional pathways

ClawBio/ClawBio1.2k

Claw Methylation Cycle

Methylation cycle analysis, enzymatic activity profiles, Net Methylation Capacity, BH4...

ClawBio/ClawBio1.2k

Claw Semantic Sim

Semantic Similarity Index for disease research literature using PubMedBERT embeddings

ClawBio/ClawBio1.2k

Clawpathy Autoresearch

Eval-driven skill tuning.

ClawBio/ClawBio1.2k

Clinical Trial Finder

Find clinical trials for a gene, variant, or condition from ClinicalTrials.gov + EUCTR...

ClawBio/ClawBio1.2k

Clinical Variant Prioritizer

Screen a genotype set (array or WGS-derived) against OMIM-morbid, ACMG-SF and...

ClawBio/ClawBio1.2k

Clinical Variant Reporter

Classify germline variants from VCF/BCF files according to the ACMG/AMP 2015...

ClawBio/ClawBio1.2k

Clinpgx

Query the ClinPGx API for pharmacogenomic gene-drug data, clinical annotations, CPIC...

ClawBio/ClawBio1.2k

Cnv Acmg Classifier

Classify structural variants / copy-number variants (deletions and duplications) using...

ClawBio/ClawBio1.2k

Crispr Screen Triage

Deterministic CRISPR screen hit ranking from local guide-level count tables

ClawBio/ClawBio1.2k

Data Extractor

Extract numerical data from scientific figure images using Claude vision + OpenCV...

ClawBio/ClawBio1.2k

De Summary

Summarise pre-computed differential expression results with ranked gene lists...

ClawBio/ClawBio1.2k

Deepspot M

Transcriptome-wide virtual spatial transcriptomics from H&E histology with DeepSpot-M.

ClawBio/ClawBio1.2k

Diff Visualizer

Rich downstream visualisation and reporting for bulk RNA-seq differential expression...

ClawBio/ClawBio1.2k

Dnasp

Population genetics of pre-aligned DNA sequences or multi-sample VCFs using selected...

ClawBio/ClawBio1.2k

Drug Photo

Medication photo to personalised PGx dosage card via Claude vision, snap a pill, get...

ClawBio/ClawBio1.2k

Drug Repurposing Screen

Objective-driven pooled viability screen analysis: QC, hit calling...

ClawBio/ClawBio1.2k

Ena Fetch

Query metadata and download sequencing data from the European Nucleotide Archive (ENA)...

ClawBio/ClawBio1.2k

Eqtl Catalogue Region Fetch

Fetch a region of cis-eQTL summary statistics from EBI eQTL Catalogue v7+ via...

ClawBio/ClawBio1.2k

Equity Scorer

Compute HEIM diversity and equity metrics from VCF or ancestry data.

ClawBio/ClawBio1.2k

Fastreer

Phylogenetic distance matrices and trees from VCF or FASTA data using the fastreeR...

ClawBio/ClawBio1.2k

Fine Mapping

Statistical fine-mapping of GWAS loci using SuSiE, SuSiE-inf, and Approximate Bayes...

ClawBio/ClawBio1.2k

Flow Bio

Flow.bio API bridge, authenticate, browse pipelines/samples/projects, search, upload...

ClawBio/ClawBio1.2k